In vitro and in silico evaluation of some plant extracts and phytocompounds against multidrug-resistant Gram-negative bacteria

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Özet

The spread of multidrug-resistant Gram-negative (MDR) bacteria is a global public health problem, as infections caused by MDR Gram-negative bacteria are difficult to treat. New antibiotic agents need to be developed to overcome this problem, and phytochemicals show promise at this point. In this study, methanol extracts were prepared from cinnamon, thyme, nettle, white tea, rosehip, and antibacterial activity of the methanol extracts was studied against two MDR Gram-Negative bacteria (K. pneumoniae and A. baumannii) by broth microdilution method. The MICs of methanol extracts of cinnamon, rosehip, thyme, white tea for A. baumannii were found as 0.015125 g/ml, 0.07825 g/ml, 0.030625 g/ml, 0.00796875 g/ml, respectively. It was found that only cinnamon methanol extract had antibacterial activity in the used extract concentrations against K. pneumoniae and the MIC value was 0.0605 g/ml. The effects of plant methanol extract with antibacterial activity and imipenem combinations were studied in vitro using the checkerboard method. The FIC Indexes were obtained from the checkerboard results and it was observed that the combination of methanol extract and imipenem showed an antagonistic or additive/indifferent effect but not a synergistic effect. We evaluated the binding affinity of epigallocatechin 3-gallate, quercetin, cinnamaldehyde, carvacrol, and thymol phytocompounds using in silico methods, which are well known as a phytocompounds in white tea, cinnamon, thyme, nettle, and rosehip and have antibacterial activities. The results suggested that these phytocompounds should be supported with in vivo and in vitro experiments to investigate their potential for being inhibitor candidates.

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DOI
https://doi.org/10.1007/s13596-021-00602-6Yayıncı resmi DOI adresi
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Tam Kayıt
AlanDeğerDil
dc.contributor.authorAydemir, Eda
dc.contributor.authorSarıyer, Emrah
dc.contributor.authorAkyıldız, Esma
dc.contributor.authorÖzad Düzgün, Azer
dc.contributor.authorCamadan, Yasemin
dc.contributor.authorSaral Sarıyer, Ayşegül
dc.date.accessioned2026-10-22T10:19:22.650744080Z
dc.date.available2026-10-22T10:19:22.650744080Z
dc.date.issued2022
dc.description.abstractThe spread of multidrug-resistant Gram-negative (MDR) bacteria is a global public health problem, as infections caused by MDR Gram-negative bacteria are difficult to treat. New antibiotic agents need to be developed to overcome this problem, and phytochemicals show promise at this point. In this study, methanol extracts were prepared from cinnamon, thyme, nettle, white tea, rosehip, and antibacterial activity of the methanol extracts was studied against two MDR Gram-Negative bacteria (K. pneumoniae and A. baumannii) by broth microdilution method. The MICs of methanol extracts of cinnamon, rosehip, thyme, white tea for A. baumannii were found as 0.015125 g/ml, 0.07825 g/ml, 0.030625 g/ml, 0.00796875 g/ml, respectively. It was found that only cinnamon methanol extract had antibacterial activity in the used extract concentrations against K. pneumoniae and the MIC value was 0.0605 g/ml. The effects of plant methanol extract with antibacterial activity and imipenem combinations were studied in vitro using the checkerboard method. The FIC Indexes were obtained from the checkerboard results and it was observed that the combination of methanol extract and imipenem showed an antagonistic or additive/indifferent effect but not a synergistic effect. We evaluated the binding affinity of epigallocatechin 3-gallate, quercetin, cinnamaldehyde, carvacrol, and thymol phytocompounds using in silico methods, which are well known as a phytocompounds in white tea, cinnamon, thyme, nettle, and rosehip and have antibacterial activities. The results suggested that these phytocompounds should be supported with in vivo and in vitro experiments to investigate their potential for being inhibitor candidates.
dc.description.sponsorshipArtvin Coruh University, (BAP- 2018, F83.02.03)
dc.description.sponsorshipGrid Computing Center
dc.description.sponsorshipTRUBA
dc.description.sponsorshipTrabzon Fatih State Hospital
dc.description.sponsorshipArtvin Çoruh Üniversitesi, ACU
dc.identifier.doi10.1007/s13596-021-00602-6
dc.identifier.eissn2662-4060
dc.identifier.endpage759
dc.identifier.issn2662-4052
dc.identifier.issue4
dc.identifier.scopus2-s2.0-85111779384
dc.identifier.startpage749
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/gumushane/11796
dc.identifier.volume22
dc.identifier.wosWOS:000681160200001
dc.language.isoen
dc.publisherSpringer
dc.relation.ispartofAdvances in Traditional Medicine
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectAntibacterial activity
dc.subjectMolecular docking
dc.subjectMultidrug-resistant Gram-negative bacteria
dc.subjectOXA-23
dc.subjectPlant methanol extracts
dc.subject.classificationPharmacology & Pharmacy
dc.subject.otheramikacin
dc.subject.otheramoxicillin plus clavulanic acid
dc.subject.otherampicillin
dc.subject.otheraztreonam
dc.subject.othercarvacrol
dc.subject.othercefixime
dc.subject.otherceftazidime
dc.subject.otherceftriaxone
dc.subject.othercefuroxime
dc.subject.othercinnamaldehyde
dc.subject.othercinnamon extract
dc.subject.otherciprofloxacin
dc.subject.othercolistin
dc.subject.othercotrimoxazole
dc.subject.otherepigallocatechin gallate
dc.subject.otherertapenem
dc.subject.otherfosfomycin
dc.subject.othergentamicin
dc.subject.otherimipenem
dc.subject.otherlevofloxacin
dc.subject.othermeropenem
dc.subject.othernetilmicin
dc.subject.otherphytochemical
dc.subject.otherpiperacillin
dc.subject.otherpiperacillin plus tazobactam
dc.subject.otherplant extract
dc.subject.otherquercetin
dc.subject.otherrosehip extract
dc.subject.othertetracycline
dc.subject.otherthymol
dc.subject.otherThymus vulgaris extract
dc.subject.othertigecycline
dc.subject.othertobramycin
dc.subject.otherunclassified drug
dc.subject.otherwhite tea extract
dc.subject.otherAcinetobacter baumannii
dc.subject.otherantibacterial activity
dc.subject.otherantibiotic sensitivity
dc.subject.otherArticle
dc.subject.otherbinding affinity
dc.subject.otherbroth dilution
dc.subject.othercinnamon
dc.subject.othercomputer model
dc.subject.othercontrolled study
dc.subject.otherdrug antagonism
dc.subject.otherdrug screening
dc.subject.otherin vitro study
dc.subject.otherin vivo study
dc.subject.otherKlebsiella pneumoniae
dc.subject.otherminimum inhibitory concentration
dc.subject.othermultidrug resistant Gram negative bacterium
dc.subject.othernettle
dc.subject.othernonhuman
dc.subject.otherplant
dc.subject.otherpublic health
dc.subject.othertea
dc.subject.otherthyme
dc.titleIn vitro and in silico evaluation of some plant extracts and phytocompounds against multidrug-resistant Gram-negative bacteria
dc.typeArticle
dspace.entity.typePublication
rdl.citation.openalex6
rdl.citation.scopus6
rdl.citation.wos4
rdl.oa.statusclosed
rdl.scopus.quartileQ2
rdl.sdgSDG03
rdl.source.indexSCOPUS
rdl.source.indexWOS
rdl.wos.indexEmerging Sources Citation Index (ESCI)