Detection of class 1 integron in Acinetobacter baumannii isolates collected from nine hospitals in Turkey

MakaleAçık Erişim
  • SDG 3 · Sağlık ve Kaliteli Yaşam

Özet

Objective: To investigate the antibiotic resistance genes inserted into class 1 and class 2 integrons in Acinetobacter baumannii (A. baumannii) isolates obtained from nine different cities in Turkey. Methods: A collection of 281 A. baumannii clinical isolates were collected from nine diferent state hospitals in Turkey and were confirmed as A. baumannii by conventional biochemical, API testing and bla-OXA-51 specific PCR. The isolates were examined by PCR for existence of class 1 and 2 integron gene cassettes. Results: They were characterized by antimicrobial susceptibility testing and the highest resistance rates were determined for piperacillin (90.03%), ciprofloxacin (87.54%), cefepime and trimethoprim/sulfamethoxazole (81.13%). The lowest resistance rates was for cefotaxime (3.55%). class I integrons were detected in 6.4% (18/281) of A. baumannii strains and no class 2 integron was detected. The gene cassettes of class 1 integrons AacC1-AAC(3) I-aadA1, AacC1-aadA1, AAC(3)-I, AAC(3)-I -AAC(3)-I -aadA1, TEM-1, AAC(3)-I-aadA1 - AAC(3)-I -AAC(3)-I, AAC(3)-I -AAC(3)-I -AAC(3)-I -aadA1, AAC(3)-I - aadA1, AAC(3)-I-AAC(3)-I, AAC(3)-I-aadA1-AAC(3)-I-aadA1, AAC(3)-I-AAC(3)-I-aadA1-AAC(3)-I-aadA1 were detected in eighteen strains. The aac genes family were most frequently found integrated into the class 1 integrons and it was followed by aadA genes and TEM-1 genes. Conclusions: This is an extensive study on the distribution of class 1 integron among A. baumannii in Turkey. In addition to these, two new alleles were observed. Their percentage rates of similarity to other cassettes are 95% aadA1 (TKA18) and 89% aadA1 (ANKA3).

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AlanDeğerDil
dc.contributor.authorÇIÇek, Ayşegül Çopur
dc.contributor.authorDüzgün, Azer Özad
dc.contributor.authorSaral, Ayşegül
dc.contributor.authorKayman, Tuba
dc.contributor.authorÇIzmecI, Zeynep
dc.contributor.authorBalci, Pervin Özlem
dc.contributor.authorDal, Tuba
dc.contributor.authorFirat, Mehmet
dc.contributor.authorTosun, Ismail
dc.contributor.authorAlitntop, Yasemin Ay
dc.contributor.authorÇalişkan, Ahmet
dc.contributor.authorYazici, Yelda
dc.contributor.authorSandalli, Cemal
dc.date.accessioned2026-10-22T10:20:57.609310856Z
dc.date.available2026-10-22T10:20:57.609310856Z
dc.date.issued2013
dc.description.abstractObjective: To investigate the antibiotic resistance genes inserted into class 1 and class 2 integrons in Acinetobacter baumannii (A. baumannii) isolates obtained from nine different cities in Turkey. Methods: A collection of 281 A. baumannii clinical isolates were collected from nine diferent state hospitals in Turkey and were confirmed as A. baumannii by conventional biochemical, API testing and bla-OXA-51 specific PCR. The isolates were examined by PCR for existence of class 1 and 2 integron gene cassettes. Results: They were characterized by antimicrobial susceptibility testing and the highest resistance rates were determined for piperacillin (90.03%), ciprofloxacin (87.54%), cefepime and trimethoprim/sulfamethoxazole (81.13%). The lowest resistance rates was for cefotaxime (3.55%). class I integrons were detected in 6.4% (18/281) of A. baumannii strains and no class 2 integron was detected. The gene cassettes of class 1 integrons AacC1-AAC(3) I-aadA1, AacC1-aadA1, AAC(3)-I, AAC(3)-I -AAC(3)-I -aadA1, TEM-1, AAC(3)-I-aadA1 - AAC(3)-I -AAC(3)-I, AAC(3)-I -AAC(3)-I -AAC(3)-I -aadA1, AAC(3)-I - aadA1, AAC(3)-I-AAC(3)-I, AAC(3)-I-aadA1-AAC(3)-I-aadA1, AAC(3)-I-AAC(3)-I-aadA1-AAC(3)-I-aadA1 were detected in eighteen strains. The aac genes family were most frequently found integrated into the class 1 integrons and it was followed by aadA genes and TEM-1 genes. Conclusions: This is an extensive study on the distribution of class 1 integron among A. baumannii in Turkey. In addition to these, two new alleles were observed. Their percentage rates of similarity to other cassettes are 95% aadA1 (TKA18) and 89% aadA1 (ANKA3).
dc.identifier.doi10.1016/s2221-1691(13)60149-5
dc.identifier.endpage747
dc.identifier.issn2221-1691
dc.identifier.issue9
dc.identifier.pmid23998017
dc.identifier.scopus2-s2.0-84883257201
dc.identifier.startpage743
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/gumushane/13127
dc.identifier.volume3
dc.language.isoen
dc.relation.ispartofAsian Pacific Journal of Tropical Biomedicine
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectAcinetobacter baumannii
dc.subjectClass 1 integron
dc.subjectGene cassette
dc.subjectResistance
dc.subject.otherAcinetobacter baumannii
dc.subject.otherAcinetobacter Infections
dc.subject.otherAnti-Bacterial Agents
dc.subject.otherCross Infection
dc.subject.otherDrug Resistance, Bacterial
dc.subject.otherHospitals
dc.subject.otherHumans
dc.subject.otherIntegrons
dc.subject.otherMicrobial Sensitivity Tests
dc.subject.otherTurkey
dc.subject.otherClass 1 integron
dc.subject.otherGene cassette
dc.subject.otherResistance
dc.subject.otheramikacin
dc.subject.otherampicillin
dc.subject.othercefepime
dc.subject.othercefotaxime
dc.subject.otherceftazidime
dc.subject.otherciprofloxacin
dc.subject.othercotrimoxazole
dc.subject.otherDNA
dc.subject.othergenomic DNA
dc.subject.othergentamicin
dc.subject.otherimipenem
dc.subject.otherlevofloxacin
dc.subject.othermeropenem
dc.subject.otherpiperacillin
dc.subject.othersulbactam
dc.subject.othertetracycline
dc.subject.othertobramycin
dc.subject.otherallele
dc.subject.otherantibiotic resistance
dc.subject.otherarticle
dc.subject.otherbacterial genetics
dc.subject.otherbacterial strain
dc.subject.otherbacterium isolate
dc.subject.otherDNA determination
dc.subject.otherDNA sequence
dc.subject.otherintegron
dc.subject.othermultigene family
dc.subject.othernonhuman
dc.subject.otherpolymerase chain reaction
dc.subject.otherpriority journal
dc.subject.otherTurkey (republic)
dc.titleDetection of class 1 integron in Acinetobacter baumannii isolates collected from nine hospitals in Turkey
dc.typeArticle
dspace.entity.typePublication
rdl.citation.openalex24
rdl.citation.scopus25
rdl.oa.statusbronze
rdl.oa.urlhttps://www.sciencedirect.com/science/article/pii/S2221169113601495
rdl.sdgSDG03
rdl.source.indexSCOPUS