Detection of class 1 integron in Acinetobacter baumannii isolates collected from nine hospitals in Turkey
Özet
Objective: To investigate the antibiotic resistance genes inserted into class 1 and class 2 integrons in Acinetobacter baumannii (A. baumannii) isolates obtained from nine different cities in Turkey. Methods: A collection of 281 A. baumannii clinical isolates were collected from nine diferent state hospitals in Turkey and were confirmed as A. baumannii by conventional biochemical, API testing and bla-OXA-51 specific PCR. The isolates were examined by PCR for existence of class 1 and 2 integron gene cassettes. Results: They were characterized by antimicrobial susceptibility testing and the highest resistance rates were determined for piperacillin (90.03%), ciprofloxacin (87.54%), cefepime and trimethoprim/sulfamethoxazole (81.13%). The lowest resistance rates was for cefotaxime (3.55%). class I integrons were detected in 6.4% (18/281) of A. baumannii strains and no class 2 integron was detected. The gene cassettes of class 1 integrons AacC1-AAC(3) I-aadA1, AacC1-aadA1, AAC(3)-I, AAC(3)-I -AAC(3)-I -aadA1, TEM-1, AAC(3)-I-aadA1 - AAC(3)-I -AAC(3)-I, AAC(3)-I -AAC(3)-I -AAC(3)-I -aadA1, AAC(3)-I - aadA1, AAC(3)-I-AAC(3)-I, AAC(3)-I-aadA1-AAC(3)-I-aadA1, AAC(3)-I-AAC(3)-I-aadA1-AAC(3)-I-aadA1 were detected in eighteen strains. The aac genes family were most frequently found integrated into the class 1 integrons and it was followed by aadA genes and TEM-1 genes. Conclusions: This is an extensive study on the distribution of class 1 integron among A. baumannii in Turkey. In addition to these, two new alleles were observed. Their percentage rates of similarity to other cassettes are 95% aadA1 (TKA18) and 89% aadA1 (ANKA3).
Anahtar Kelimeler
Tam Kayıt
| Alan | Değer | Dil |
|---|---|---|
| dc.contributor.author | ÇIÇek, Ayşegül Çopur | |
| dc.contributor.author | Düzgün, Azer Özad | |
| dc.contributor.author | Saral, Ayşegül | |
| dc.contributor.author | Kayman, Tuba | |
| dc.contributor.author | ÇIzmecI, Zeynep | |
| dc.contributor.author | Balci, Pervin Özlem | |
| dc.contributor.author | Dal, Tuba | |
| dc.contributor.author | Firat, Mehmet | |
| dc.contributor.author | Tosun, Ismail | |
| dc.contributor.author | Alitntop, Yasemin Ay | |
| dc.contributor.author | Çalişkan, Ahmet | |
| dc.contributor.author | Yazici, Yelda | |
| dc.contributor.author | Sandalli, Cemal | |
| dc.date.accessioned | 2026-10-22T10:20:57.609310856Z | |
| dc.date.available | 2026-10-22T10:20:57.609310856Z | |
| dc.date.issued | 2013 | |
| dc.description.abstract | Objective: To investigate the antibiotic resistance genes inserted into class 1 and class 2 integrons in Acinetobacter baumannii (A. baumannii) isolates obtained from nine different cities in Turkey. Methods: A collection of 281 A. baumannii clinical isolates were collected from nine diferent state hospitals in Turkey and were confirmed as A. baumannii by conventional biochemical, API testing and bla-OXA-51 specific PCR. The isolates were examined by PCR for existence of class 1 and 2 integron gene cassettes. Results: They were characterized by antimicrobial susceptibility testing and the highest resistance rates were determined for piperacillin (90.03%), ciprofloxacin (87.54%), cefepime and trimethoprim/sulfamethoxazole (81.13%). The lowest resistance rates was for cefotaxime (3.55%). class I integrons were detected in 6.4% (18/281) of A. baumannii strains and no class 2 integron was detected. The gene cassettes of class 1 integrons AacC1-AAC(3) I-aadA1, AacC1-aadA1, AAC(3)-I, AAC(3)-I -AAC(3)-I -aadA1, TEM-1, AAC(3)-I-aadA1 - AAC(3)-I -AAC(3)-I, AAC(3)-I -AAC(3)-I -AAC(3)-I -aadA1, AAC(3)-I - aadA1, AAC(3)-I-AAC(3)-I, AAC(3)-I-aadA1-AAC(3)-I-aadA1, AAC(3)-I-AAC(3)-I-aadA1-AAC(3)-I-aadA1 were detected in eighteen strains. The aac genes family were most frequently found integrated into the class 1 integrons and it was followed by aadA genes and TEM-1 genes. Conclusions: This is an extensive study on the distribution of class 1 integron among A. baumannii in Turkey. In addition to these, two new alleles were observed. Their percentage rates of similarity to other cassettes are 95% aadA1 (TKA18) and 89% aadA1 (ANKA3). | |
| dc.identifier.doi | 10.1016/s2221-1691(13)60149-5 | |
| dc.identifier.endpage | 747 | |
| dc.identifier.issn | 2221-1691 | |
| dc.identifier.issue | 9 | |
| dc.identifier.pmid | 23998017 | |
| dc.identifier.scopus | 2-s2.0-84883257201 | |
| dc.identifier.startpage | 743 | |
| dc.identifier.uri | https://rdlopen.rawdatalibrary.net/r/gumushane/13127 | |
| dc.identifier.volume | 3 | |
| dc.language.iso | en | |
| dc.relation.ispartof | Asian Pacific Journal of Tropical Biomedicine | |
| dc.rights | info:eu-repo/semantics/openAccess | |
| dc.subject | Acinetobacter baumannii | |
| dc.subject | Class 1 integron | |
| dc.subject | Gene cassette | |
| dc.subject | Resistance | |
| dc.subject.other | Acinetobacter baumannii | |
| dc.subject.other | Acinetobacter Infections | |
| dc.subject.other | Anti-Bacterial Agents | |
| dc.subject.other | Cross Infection | |
| dc.subject.other | Drug Resistance, Bacterial | |
| dc.subject.other | Hospitals | |
| dc.subject.other | Humans | |
| dc.subject.other | Integrons | |
| dc.subject.other | Microbial Sensitivity Tests | |
| dc.subject.other | Turkey | |
| dc.subject.other | Class 1 integron | |
| dc.subject.other | Gene cassette | |
| dc.subject.other | Resistance | |
| dc.subject.other | amikacin | |
| dc.subject.other | ampicillin | |
| dc.subject.other | cefepime | |
| dc.subject.other | cefotaxime | |
| dc.subject.other | ceftazidime | |
| dc.subject.other | ciprofloxacin | |
| dc.subject.other | cotrimoxazole | |
| dc.subject.other | DNA | |
| dc.subject.other | genomic DNA | |
| dc.subject.other | gentamicin | |
| dc.subject.other | imipenem | |
| dc.subject.other | levofloxacin | |
| dc.subject.other | meropenem | |
| dc.subject.other | piperacillin | |
| dc.subject.other | sulbactam | |
| dc.subject.other | tetracycline | |
| dc.subject.other | tobramycin | |
| dc.subject.other | allele | |
| dc.subject.other | antibiotic resistance | |
| dc.subject.other | article | |
| dc.subject.other | bacterial genetics | |
| dc.subject.other | bacterial strain | |
| dc.subject.other | bacterium isolate | |
| dc.subject.other | DNA determination | |
| dc.subject.other | DNA sequence | |
| dc.subject.other | integron | |
| dc.subject.other | multigene family | |
| dc.subject.other | nonhuman | |
| dc.subject.other | polymerase chain reaction | |
| dc.subject.other | priority journal | |
| dc.subject.other | Turkey (republic) | |
| dc.title | Detection of class 1 integron in Acinetobacter baumannii isolates collected from nine hospitals in Turkey | |
| dc.type | Article | |
| dspace.entity.type | Publication | |
| rdl.citation.openalex | 24 | |
| rdl.citation.scopus | 25 | |
| rdl.oa.status | bronze | |
| rdl.oa.url | https://www.sciencedirect.com/science/article/pii/S2221169113601495 | |
| rdl.sdg | SDG03 | |
| rdl.source.index | SCOPUS |

