Characterization of novel VIM carbapenemase, VIM-38, and first detection of GES-5 carbapenem-hydrolyzing β-lactamases in Pseudomonas aeruginosa in Turkey

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Özet

Pseudomonas aeruginosa isolates were collected form a Turkish hospital. Antimicrobial susceptibility was performed using the Vitek 2 Compact system, and 24 isolates were categorized as multidrug resistant (n = 18), extensively-drug resistant (n = 5), or pan-drug resistant (n = I). PCR and DNA sequence analysis revealed that 1 strain possessed the bla(GES-5) and another carried a novel bla(VIM) variant, named VIM-38. This new gene exhibited 1 amino acid substitution (Ala265Val) in comparison to its closest variant, VIM-5. Both VIM encoding genes were clones and demonstrated similar susceptibility profile when expressed in identical background. The presence of VIM-38 increases the diversity of carbapenemases in Turkey. (C) 2014 Elsevier Inc. All rights reserved.

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AlanDeğerDil
dc.contributor.authorIraz, Meryem
dc.contributor.authorDuzgun, Azer Ozad
dc.contributor.authorCicek, Aysegul Copur
dc.contributor.authorBonnin, Remy A.
dc.contributor.authorCeylan, Aysenur
dc.contributor.authorSaral, Aysegul
dc.contributor.authorNordmann, Patrice
dc.contributor.authorSandalli, Cemal
dc.date.accessioned2026-10-22T09:23:07.678968463Z
dc.date.available2026-10-22T09:23:07.678968463Z
dc.date.issued2014-03
dc.description.abstractPseudomonas aeruginosa isolates were collected form a Turkish hospital. Antimicrobial susceptibility was performed using the Vitek 2 Compact system, and 24 isolates were categorized as multidrug resistant (n = 18), extensively-drug resistant (n = 5), or pan-drug resistant (n = I). PCR and DNA sequence analysis revealed that 1 strain possessed the bla(GES-5) and another carried a novel bla(VIM) variant, named VIM-38. This new gene exhibited 1 amino acid substitution (Ala265Val) in comparison to its closest variant, VIM-5. Both VIM encoding genes were clones and demonstrated similar susceptibility profile when expressed in identical background. The presence of VIM-38 increases the diversity of carbapenemases in Turkey. (C) 2014 Elsevier Inc. All rights reserved.
dc.description.sponsorshipRecep Tayyip Erdogan University Research Fund [BAP-2012.106.01.11, BAP-2011.102.03.3]
dc.identifier.doi10.1016/j.diagmicrobio.2013.12.003
dc.identifier.eissn1879-0070
dc.identifier.endpage294
dc.identifier.issn0732-8893
dc.identifier.issue3
dc.identifier.pmid24428980
dc.identifier.scopus2-s2.0-84893745009
dc.identifier.startpage292
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/gumushane/10597
dc.identifier.volume78
dc.identifier.wosWOS:000332056500018
dc.language.isoen
dc.publisherELSEVIER SCIENCE INC
dc.relation.ispartofDIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectPseudomonas aeruginosa
dc.subjectCarbapenemase
dc.subjectbeta-lactamase
dc.subjectESBL
dc.subjectClass 1 integron
dc.subject.classificationInfectious Diseases
dc.subject.classificationMicrobiology
dc.subject.otherCLINICAL ISOLATE
dc.subject.otherMULTIPLEX PCR
dc.subject.otherGENES
dc.subject.otherINFECTIONS
dc.subject.otherDIVERSITY
dc.titleCharacterization of novel VIM carbapenemase, VIM-38, and first detection of GES-5 carbapenem-hydrolyzing β-lactamases in Pseudomonas aeruginosa in Turkey
dc.typeArticle
dspace.entity.typePublication
rdl.citation.openalex24
rdl.citation.scopus27
rdl.citation.wos24
rdl.departmentDepartment of Genetics and Bioengineering, Faculty of Engineering and Natural Sciences, Gümüşhane University, 29100 Gumushane, Turkey
rdl.oa.statusclosed
rdl.sdgSDG03
rdl.source.indexWOS
rdl.source.indexSCOPUS
rdl.source.indexPUBMED
rdl.wos.indexScience Citation Index Expanded (SCI-EXPANDED)