Analysis of transcriptional profiles of Saccharomyces cerevisiae exposed to bisphenol A

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Özet

Bisphenol A (BPA), an endocrine disrupting chemical, is used as a monomer in the production of epoxy resins and polycarbonates, and as a plasticizer in polyvinyl chloride. As such, it is produced in large quantities worldwide and continuously leaches into the environment. To capture the genome reprogramming in eukaryotic cells under BPA exposure, here, we used Saccharomyces cerevisiae as model organism and analyzed the genome-wide transcriptional profiles of S. cerevisiae BY4742 in response to BPA, focusing on two exposure scenarios: (1) exposure to a low inhibition concentration (50 mg/L; resulting in <10 % inhibition in cell number) and (2) a high inhibition concentration (300 mg/L; resulting in >70 % inhibition in cell number). Based on the transcriptional profiling analyses, 81 genes were repressed and 104 genes were induced in response to 50 mg/L BPA. Meanwhile, 378 genes were downregulated and 606 genes were significantly upregulated upon exposure to 300 mg/L BPA. While similar processes were affected by exposure to distinct BPA concentrations, including mitochondrial processes, nucleobase-containing small molecule metabolic processes, transcription from the RNA polymerase II promoter, and mitosis and associated processes, the number and magnitude of differentially expressed genes differ between low and high inhibition concentration treatments. For example, exposure to 300 mg/L BPA resulted in severe changes in the expression levels of several genes involved in oxidative phosphorylation, the tricarboxylic acid cycle, ribosomal activity, replication, and chemical responses. Conversely, only slight changes were observed in the expression of genes involved in these processes in cells exposed to 50 mg/L BPA. These results demonstrate that yeast cells respond to BPA in a concentration-dependent manner at the transcriptional level via different genes and provide insight into the molecular mechanisms underlying the modes of action of BPA.

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AlanDeğerDil
dc.contributor.authorBereketoglu, Ceyhun
dc.contributor.authorArga, Kazim Yalcin
dc.contributor.authorEraslan, Serpil
dc.contributor.authorMertoglu, Bulent
dc.date.accessioned2026-10-22T10:23:25.253379254Z
dc.date.available2026-10-22T10:23:25.253379254Z
dc.date.issued2017
dc.description.abstractBisphenol A (BPA), an endocrine disrupting chemical, is used as a monomer in the production of epoxy resins and polycarbonates, and as a plasticizer in polyvinyl chloride. As such, it is produced in large quantities worldwide and continuously leaches into the environment. To capture the genome reprogramming in eukaryotic cells under BPA exposure, here, we used Saccharomyces cerevisiae as model organism and analyzed the genome-wide transcriptional profiles of S. cerevisiae BY4742 in response to BPA, focusing on two exposure scenarios: (1) exposure to a low inhibition concentration (50 mg/L; resulting in <10 % inhibition in cell number) and (2) a high inhibition concentration (300 mg/L; resulting in >70 % inhibition in cell number). Based on the transcriptional profiling analyses, 81 genes were repressed and 104 genes were induced in response to 50 mg/L BPA. Meanwhile, 378 genes were downregulated and 606 genes were significantly upregulated upon exposure to 300 mg/L BPA. While similar processes were affected by exposure to distinct BPA concentrations, including mitochondrial processes, nucleobase-containing small molecule metabolic processes, transcription from the RNA polymerase II promoter, and mitosis and associated processes, the number and magnitude of differentially expressed genes differ between low and high inhibition concentration treatments. For example, exposure to 300 mg/L BPA resulted in severe changes in the expression levels of several genes involved in oxidative phosphorylation, the tricarboxylic acid cycle, ribosomal activity, replication, and chemical responses. Conversely, only slight changes were observed in the expression of genes involved in these processes in cells exposed to 50 mg/L BPA. These results demonstrate that yeast cells respond to BPA in a concentration-dependent manner at the transcriptional level via different genes and provide insight into the molecular mechanisms underlying the modes of action of BPA.
dc.description.sponsorshipMarmara University Scientific Research Commission, (FEN-A-120613-0268, FEN-C-DRP-121214-0385)
dc.identifier.doi10.1007/s00294-016-0633-z
dc.identifier.eissn1432-0983
dc.identifier.endpage274
dc.identifier.issn0172-8083
dc.identifier.issue2
dc.identifier.pmid27460658
dc.identifier.scopus2-s2.0-84979658159
dc.identifier.startpage253
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/gumushane/14984
dc.identifier.volume63
dc.identifier.wosWOS:000399176400011
dc.language.isoen
dc.publisherSpringer Verlag
dc.relation.ispartofCurrent Genetics
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectBisphenol A
dc.subjectExposure
dc.subjectSaccharomyces cerevisiae
dc.subjectTranscriptional profiles
dc.subject.classificationGenetics & Heredity
dc.subject.otherAir Pollutants, Occupational
dc.subject.otherBenzhydryl Compounds
dc.subject.otherDose-Response Relationship, Drug
dc.subject.otherGene Expression Profiling
dc.subject.otherGene Expression Regulation, Fungal
dc.subject.otherGene Ontology
dc.subject.otherGenes, Fungal
dc.subject.otherOligonucleotide Array Sequence Analysis
dc.subject.otherPhenols
dc.subject.otherReverse Transcriptase Polymerase Chain Reaction
dc.subject.otherSaccharomyces cerevisiae
dc.subject.otherSaccharomyces cerevisiae Proteins
dc.subject.otherTranscriptome
dc.subject.other4,4' isopropylidenediphenol
dc.subject.otherABC transporter
dc.subject.otherATP synthase ATP3
dc.subject.othercytochrome c oxidase COX4
dc.subject.othercytochrome c oxidoreductase QCR2
dc.subject.otherGTPase activating protein CIN2
dc.subject.otherguanosine triphosphatase activating protein
dc.subject.othernucleic acid base
dc.subject.othernucleolar protein NOP15
dc.subject.otheroxidoreductase
dc.subject.otherpeptides and proteins
dc.subject.otherplasma membrane ATP binding cassette transporter PDR5
dc.subject.otherplasma membrane ATP binding cassette transporter SNQ2
dc.subject.otherplasma membrane na pi cotransporter PHO89
dc.subject.otherproton transporting adenosine triphosphate synthase
dc.subject.otherRNA polymerase II
dc.subject.othersuccinate dehydrogenase
dc.subject.othersuccinate dehydrogenase SDH1
dc.subject.otheru three associated protein UTP23
dc.subject.otherubiquinone oxidoreductase NDI1
dc.subject.otherunclassified drug
dc.subject.otherair pollutant
dc.subject.otherbenzhydryl derivative
dc.subject.otherphenol derivative
dc.subject.otherSaccharomyces cerevisiae protein
dc.subject.otherArticle
dc.subject.othercell count
dc.subject.othercell function
dc.subject.othercontrolled study
dc.subject.otherdown regulation
dc.subject.othereukaryotic cell
dc.subject.othergene induction
dc.subject.othergene repression
dc.subject.othergenetic transcription
dc.subject.othergenome
dc.subject.othergenotoxicity
dc.subject.otherinhibitory concentration
dc.subject.othermitochondrion
dc.subject.othernonhuman
dc.subject.othernucleic acid metabolism
dc.subject.otherpriority journal
dc.subject.otherpromoter region
dc.subject.othertranscriptomics
dc.subject.otherupregulation
dc.subject.otherDNA microarray
dc.subject.otherdose response
dc.subject.otherdrug effects
dc.subject.otherfungal gene
dc.subject.othergene expression regulation
dc.subject.othergenetics
dc.subject.othergrowth, development and aging
dc.subject.otherprocedures
dc.subject.otherreverse transcription polymerase chain reaction
dc.subject.othertoxicity
dc.titleAnalysis of transcriptional profiles of Saccharomyces cerevisiae exposed to bisphenol A
dc.typeArticle
rdl.citation.openalex21
rdl.citation.scopus20
rdl.citation.wos18
rdl.departmentDepartment of Genetics and Bioengineering, Faculty of Engineering and Natural Sciences, Gümüşhane University, Gümüşhane, Turkey
rdl.oa.statusgreen
rdl.oa.statuspreprint
rdl.oa.urlhttp://hdl.handle.net/11424/94503
rdl.scopus.quartileQ1
rdl.sdgSDG03
rdl.source.indexSCOPUS
rdl.source.indexWOS
rdl.source.indexPUBMED
rdl.wos.indexScience Citation Index Expanded (SCI-EXPANDED)